Stem-loop gra-MIR8767a

Accession

MI0027797

Description

Gossypium raimondii gra-MIR8767a precursor miRNA

Gene family

MIPF0001948; MIR8767

Sequence

ccucucauuuUUCAACUCUGCCAAGCAAUUGaugaaaagaaaauuacuucuuuuucaauuuucccaucuuucuuaucaagcacauuaauggaaaauguauuuuuuucuuucuauuuuucugcuucuucaauguuccauauuucuaaauuuucuuuucaccaauugcuuggcagaguugaaaaaugagagga
(((((((((((((((((((((((((((((((.(((((((((((((................................(((((.(..((((((((.............))))))))..).)))))....(((((...)))))....))))))))))))).))))))))))))))))))))))))))))))).

Structure

-                               a             acuucuuuuucaauuuucccaucuuucuuauc     c uu        augua 
 ccucucauuuUUCAACUCUGCCAAGCAAUUG ugaaaagaaaauu                                aagca a  aauggaaa     u
 ||||||||||||||||||||||||||||||| |||||||||||||                                ||||| |  ||||||||     u
 ggagaguaaaaaguugagacgguucguuaac acuuuucuuuuaa                                uucgu u  uuaucuuu     u
a                               c             -----------aucuuuauaccuuguaacuuc     c uu        cuuuu 

Annotation confidence Not enough data

Genome context

chr8: 50828267-50828457 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gra-MIR8767a

Mature gra-miR8767a

• Accession: MIMAT0034202
• Description: Gossypium raimondii gra-miR8767a mature miRNA
• Sequence: 11 - UUCAACUCUGCCAAGCAAUUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629