Stem-loop gra-MIR8779

Accession

MI0027823

Description

Gossypium raimondii gra-MIR8779 precursor miRNA

Sequence

aaugagcaaauuagucuuuguacauuagaugaaagcgcaaauuuguccuuuucuguuaaaaguuucauuuaUUUGAUCUAACGUACAGAGACUAguuugcccau
.(((.((((((((((((((((((.((((((.(((....((((((...............))))))......))).)))))).)))))))))))))))))).)))

Structure

a   a                  a      g   --gcgc      guccuu 
 aug gcaaauuagucuuuguac uuagau aaa      aaauuu      u
 ||| |||||||||||||||||| |||||| |||      ||||||      u
 uac cguuugAUCAGAGACAUG AAUCUA UUU      uuugaa      c
-   c                  C      G   auuuac      aauugu 

Annotation confidence Not enough data

Genome context

chr5: 22159918-22160021 [+]

Mature gra-miR8779

• Accession: MIMAT0034228
• Description: Gossypium raimondii gra-miR8779 mature miRNA
• Sequence: 72 - UUUGAUCUAACGUACAGAGACUA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629