Stem-loop gra-MIR8784

Accession

MI0027831

Description

Gossypium raimondii gra-MIR8784 precursor miRNA

Sequence

uagacgaccuUUUGUCGACAUGUCAGGAAAGCGCgccaaacuggaagcguuuuuuaaaaauucucaaaaaaaaaacaucuaguugggcgcgcuuuccuuugacaugucagcaaaagcucaucca
..((.((.(((((((.(((((((((((((((((((((.(((((((...(((((((..............))))))).))))))).))))))))))))..))))))))).))))))).)).))..

Structure

ua  c  c       C         --            a       agc       aaaaau 
  ga ga cuUUUGU GACAUGUCA  GGAAAGCGCgcc aacugga   guuuuuu      u
  || || ||||||| |||||||||  |||||||||||| |||||||   |||||||       
  cu cu gaaaacg cuguacagu  ccuuucgcgcgg uugaucu   caaaaaa      c
ac  a  c       a         uu            g       --a       aaaacu 

Annotation confidence Not enough data

Genome context

chr8: 1308896-1309019 [+]

Mature gra-miR8784

• Accession: MIMAT0034236
• Description: Gossypium raimondii gra-miR8784 mature miRNA
• Sequence: 11 - UUUGUCGACAUGUCAGGAAAGCGC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629