Stem-loop cfa-mir-8813-1

Accession

MI0027893

Description

Canis familiaris cfa-mir-8813-1 precursor miRNA

Gene family

MIPF0002069; mir-8813

Sequence

ucccagggcgcuuagcacagacccuggugaccugaggcucccuggcugucacucugucccaggcccguccuggccgcgggCACAGGCUGAGUCGCAGUAGAGUCUgugggguccugacccuggcaucuggccgccccuggaaggc
..((((((.((...((.((((.((.((((((((.((((((.(((....(((.((((((((.((((......))))..))).))))).)))....)))..))))))...)))))...)))..))..)))))).)))))))).....

Structure

---uc      c  uua  a    -c  -u   ---     --g      -c   gcug   c     -   -a    cg 
     ccaggg gc   gc caga  cc  ggu   gaccu   aggcuc  cug    uca ucugu ccc  ggcc  u
     |||||| ||   || ||||  ||  |||   |||||   ||||||  |||    ||| ||||| |||  ||||   
     gguccc cg   cg gucu  gg  cca   cuggg   UCUGAG  GAC    AGU GGACA ggg  ccgg  c
cggaa      -  --c  -    ac  uc   guc     gug      AU   GCUG   C     C   cg    uc 

Annotation confidence Not enough data

Genome context

chr21: 50751931-50752075 [+]

Mature cfa-miR-8813

• Accession: MIMAT0034303
• Description: Canis familiaris cfa-miR-8813 mature miRNA
• Sequence: 81 - CACAGGCUGAGUCGCAGUAGAGUCU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545