Stem-loop cfa-mir-8839

Accession

MI0027925

Description

Canis familiaris cfa-mir-8839 precursor miRNA

Sequence

ugaguaacaugcccggaggcacagagcuagUAAUUGGCAGAGCCAGGAUUCAAGCccagcgaggcugcuccagaacccgggcucuugccagcuccgcaggcugucuccuaggaguuguucgaggg
((((((((...((.((((((((.(((((.......(((((((((.((.(((..(..((((...))))..)..))).)).))))).))))))))).).....)))))))..)).))))))))....

Structure

----        aug  -c       ----- a     agUAAUU    -     A  A   AA Cc    g 
    ugaguaac   cc  ggaggca     c gagcu       GGCA GAGCC GG UUC  G  cagc  
    ||||||||   ||  |||||||     | |||||       |||| ||||| || |||  |  |||| a
    gcuuguug   gg  ccucugu     g cucga       ccgu cucgg cc aag  c  gucg  
ggga        --a  au       cggac c     -------    u     g  c   ac uc    g 

Annotation confidence Not enough data

Genome context

chr15: 1285317-1285441 [+]

Mature cfa-miR-8839

• Accession: MIMAT0034332
• Description: Canis familiaris cfa-miR-8839 mature miRNA
• Sequence: 31 - UAAUUGGCAGAGCCAGGAUUCAAGC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545