Stem-loop cfa-mir-8877

Accession

MI0027973

Description

Canis familiaris cfa-mir-8877 precursor miRNA

Sequence

gccugugagccccucuugccucgccuccucgcccaCCAUGCUGUCGUGUUCGUGGCCguggugucggcugcugcagggggugacggccugccggcagggggcgcagugugggauccaacgggaagggcc
((((.....(((.((((((((((((((((.(((...((.((((((((.((((((((((......)))))))....))).)))))))).))..))))))))))).)).))))))......)))..)))).

Structure

-    gugag   -----c      -  -        c   caC  U        G   ----       ug 
 gccu     ccc      ucuugc cu cgccuccu gcc   CA GCUGUCGU UUC    GUGGCCg  g
 ||||     |||      |||||| || |||||||| |||   || |||||||| |||    |||||||   
 cggg     ggg      agggug ga gcggggga cgg   gu cggcagug ggg    cgucggc  u
c    ---aa   caaccu      u  c        -   -cc  c        g   acgu       ug 

Annotation confidence Not enough data

Genome context

chr6: 39752034-39752162 [+]

Mature cfa-miR-8877

• Accession: MIMAT0034377
• Description: Canis familiaris cfa-miR-8877 mature miRNA
• Sequence: 36 - CCAUGCUGUCGUGUUCGUGGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545