Stem-loop cfa-mir-8908b

Accession

MI0028016

Description

Canis familiaris cfa-mir-8908b precursor miRNA

Gene family

MIPF0001890; mir-8908

Sequence

cuguccgccaugaacgaugcugugugcagugcuuuauucagggaggugcuaaugacgucaccuuagagUGAUUAGUUCCUGCCUGGAUACAggaaugcucacaaagaacggcuuuugcagu
((((..(((...........((((.(((.(.((.((((((((.(((.((((((.((.((......)))).)))))).))).)))))))).)).).))).))))......)))....)))).

Structure

-    --cc   augaacgaugc    u   g g  u        g   u      g  g  ac 
 cugu    gcc           ugug gca u cu uauucagg agg gcuaau ac uc  c
 ||||    |||           |||| ||| | || |||||||| ||| |||||| || ||   
 gacg    cgg           acac cgu a gA AUAGGUCC UCC UGAUUA Ug ag  u
u    uuuu   -----caagaa    u   a g  C        G   U      G  -  au 

Annotation confidence Not enough data

Genome context

chrX: 114678475-114678595 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from cfa-mir-8908b

Mature cfa-miR-8908b

• Accession: MIMAT0034415
• Description: Canis familiaris cfa-miR-8908b mature miRNA
• Sequence: 69 - UGAUUAGUUCCUGCCUGGAUACA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545