miRBase entry: eca-mir-8915

Stem-loop eca-mir-8915


Accession
MI0028050
Description
Equus caballus eca-mir-8915 precursor miRNA
Gene family
MIPF0002043; mir-8915


Sequence

18 reads, 0 reads per million, 1 experiments
cuuauuuggcuuugugguggcucucggucuucuugggcagCAGCACGGCCUGGAUGUUGGGCAGcacaccgcccugcgcgauagucacuuugcccagcagcuuguugagcuccucgucauugcggauggccagcugcaggugg
......(.((((.(((((((((.((.((.......(((((.(((.((((..((.((((((((((...(((((.....)))...))....)))))))))).)).)))).))).)).)))...)).)).))))).)))))))).)

Structure
cuuauu g    u    -     c  g  cuucuug   -  C   A    CU  A          -cac  ---   c 
      u gcuu gugg uggcu uc gu       ggc ag AGC CGGC  GG UGUUGGGCAG    ac   cgc c
      | |||| |||| ||||| || ||       ||| || ||| ||||  || ||||||||||    ||   ||| u
      g ugga cguc accgg ag cg       cug uc ucg guug  uc acgacccguu    ug   gcg g
------ g    -    g     u  g  ----uua   c  c   a    -u  g          ucac  aua   c 


Annotation confidence Not enough data
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Genome context
chr20: 25237783-25237925 [-]

Database links

Mature eca-miR-8915

Accession MIMAT0034443
Description Equus caballus eca-miR-8915 mature miRNA
Sequence 41 - CAGCACGGCCUGGAUGUUGGGCAG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545