miRBase entry: eca-mir-8986a

Stem-loop eca-mir-8986a


Accession
MI0028142
Description
Equus caballus eca-mir-8986a precursor miRNA
Gene family
MIPF0002062; mir-8986


Sequence

7 reads, 1 reads per million, 1 experiments
uugaugugaaccgagagaacuugucgucgaggcuagagucacgcuuggguaucagcuauugccuUAGUGUGCUAGAGUCCUCGAAGAGuaacugcugaccuuauucacuggcu
.....(((((..(((((......((.((((((((..((.((((((.(((((........))))).))))))))..)).)))))).)).......))...))).))))).....

Structure
uugau     cc   ---  -aacuug  g      -  ag  u      u     uca 
     gugaa  gag   ag       uc ucgagg cu  ag cacgcu gggua   g
     |||||  |||   ||       || |||||| ||  || |||||| |||||    
     cacuu  uuc   uc       AG AGCUCC GA  UC GUGUGA uccgu   c
ucggu     -a   cag  gucaauG  A      U  GA  -      U     uau 


Annotation confidence Not enough data
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Genome context
chr7: 78085210-78085322 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-8986a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8986a

Accession MIMAT0034523
Description Equus caballus eca-miR-8986a mature miRNA
Sequence 65 - UAGUGUGCUAGAGUCCUCGAAGAG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545