Stem-loop eca-mir-7143

Accession

MI0028156

Description

Equus caballus eca-mir-7143 precursor miRNA

Gene family

MIPF0002024; mir-7143

Sequence

6 reads, 1 reads per million, 1 experiments

gauuuugcucaacggucuccuagcaaagcaagcucagcucugaagugcaggggcuauuugcacuuccUCUGCACUUGAAGCUGAGCCUGaauggcuccuuagcugaaagaguacgaagg
.....(((((..((((.....(((....((.((((((((.(.(((((((((((............))))))))))).))))))))).))....))).....))))...)))))......

Structure

-gauuu     -aa    cuccu   aaag  a        c g           cuauu 
      ugcuc   cggu     agc    ca gcucagcu u aagugcagggg     u
      |||||   ||||     |||    || |||||||| | |||||||||||      
      augag   gucg     ucg    GU CGAGUCGA A UUCACGUCUcc     g
ggaagc     aaa    auucc   guaa  C        - G           uucac 

Annotation confidence Not enough data

Genome context

chr7: 6385363-6385481 [+]

Mature eca-miR-7143

• Accession: MIMAT0034537
• Description: Equus caballus eca-miR-7143 mature miRNA
• Sequence: 68 - UCUGCACUUGAAGCUGAGCCUG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545