Stem-loop eca-mir-9026

Accession

MI0028190

Description

Equus caballus eca-mir-9026 precursor miRNA

Sequence

accccaguggacgcgcucacgggcccaguguggaaggagcUGUCCGAGGGUCUGCAUCAGGGCUgagcaugucagagggagugccggggucugagcugacauccuccagggcacgugggcgucacacccccgaugcggguccu
........((((.(((...((((....((((((.....((((((((((((((.((.(((((.((..((((.((....)).))))..)).))))))).)))..))))..))))).)).....)))))).))))..))).)))).

Structure

accccagu    g   uca    ccca      aagga  -     --    --   U  A     G  ga    g  a 
        ggac cgc   cggg    gugugg     gc UGUCC  GAGG  GUC GC UCAGG CU  gcau uc g
        |||| |||   ||||    ||||||     || |||||  ||||  ||| || ||||| ||  |||| ||  
        ccug gcg   gccc    cacacu     ug acggg  cucc  cag cg agucu gg  cgug gg a
-------u    g   -ua    ---c      gcggg  c     ac    ua   u  -     g  gc    a  g 

Annotation confidence Not enough data

Genome context

chr26: 40551612-40551754 [+]

Mature eca-miR-9026

• Accession: MIMAT0034568
• Description: Equus caballus eca-miR-9026 mature miRNA
• Sequence: 41 - UGUCCGAGGGUCUGCAUCAGGGCU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545