miRBase entry: eca-mir-9029

Stem-loop eca-mir-9029


Accession
MI0028193
Description
Equus caballus eca-mir-9029 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
ccucacccccggguacccagguccucagcccugcugcacgUUGGACGUAUCUGAGGUGGGGCUUuucgaaguccagaggccacgaaucaaugaauuacuccaaucaccgaggagggagccugggccccuggcaaauggugauu
..(((((.(((((..(((((((......((((.((....((((((.((((((((..((.(((((((.(....).))))))).))..)))..))..))))))))).....)).)))).)))))))..))))).....)))))..

Structure
cc     ----c     ua       ccucag    g  -gcac      C   --  --   GG  G       c a 
  ucacc     ccggg  cccaggu      cccu cu     gUUGGA GUA  UC  UGA  UG GGCUUuu g a
  |||||     |||||  |||||||      |||| ||     |||||| |||  ||  |||  || ||||||| |  
  agugg     ggucc  ggguccg      ggga ga     uaaccu cau  ag  acu  gc ccggaga c g
uu     uaaac     cc       -----a    g  gccac      -   ua  ua   aa  a       c u 


Annotation confidence Not enough data
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Genome context
chr26: 33476024-33476166 [-]

Database links

Mature eca-miR-9029

Accession MIMAT0034571
Description Equus caballus eca-miR-9029 mature miRNA
Sequence 41 - UUGGACGUAUCUGAGGUGGGGCUU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545