miRBase entry: eca-mir-9061

Stem-loop eca-mir-9061


Accession
MI0028234
Description
Equus caballus eca-mir-9061 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
cagauuucucuggcuugcauugcuuccugucuuugguuuugaggggcucuggcaugagaaggucucaggaguccUGAUGGCUUUAGCGAUGUAGCUCCugaaaccuguuggagaaugaggcuggccuauggga
......((((.((((.((.....((((.......((((((.(((((((...(((((..(((((((((((...))))).))))))..).)))))))))))))))))....))))......)).))))...))))

Structure
cagauu    --u    u  -auugc    ugucuuu      g       cug    - ag      -     a 
      ucuc   ggcu gc      uucc       gguuuu aggggcu   gcau g  aagguc ucagg  
      ||||   |||| ||      ||||       |||||| |||||||   |||| |  |||||| ||||| g
      aggg   ccgg cg      gagg       ccaaag uCCUCGA   UGUA C  UUUCGG AGUcc  
------    uau    u  gaguaa    ---uugu      -       ---    G GA      U     u 


Annotation confidence Not enough data
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Genome context
chr2: 15663361-15663493 [-]

Database links

Mature eca-miR-9061

Accession MIMAT0034606
Description Equus caballus eca-miR-9061 mature miRNA
Sequence 75 - UGAUGGCUUUAGCGAUGUAGCUCC - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545