Stem-loop eca-mir-9064

Accession

MI0028237

Description

Equus caballus eca-mir-9064 precursor miRNA

Sequence

ggccuuuaagcaguaauggcuuggaugacucaggccuacuUUGAAGGUCCAUUGUCCACUGUuugacuuaggggcugugggccugggcuuucuuguaggaccugcaggcuucccaaagcgccuguuacuggcugaaagg
..(((((.((((((((((((((((....(((((((((((...(((((((((..((((((.((((.......)))).)))))).)))))))))..))))).)))).)).....))))...))).)))))).))).)))))

Structure

gg     a   -      -   ---    -auga  -    -     uUU         UU      U    ga 
  ccuuu agc aguaau ggc   uugg     cu cagg ccuac   GAAGGUCCA  GUCCAC GUuu  c
  ||||| ||| |||||| |||   ||||     || |||| |||||   |||||||||  |||||| ||||  u
  ggaaa ucg ucauug ccg   aacc     ga gucc ggaug   cuuucgggu  cgggug cggg  u
--     g   g      u   cga    cuucg  c    a     -uu         -c      u    ga 

Annotation confidence Not enough data

Genome context

chr2: 51290808-51290946 [+]

Mature eca-miR-9064

• Accession: MIMAT0034609
• Description: Equus caballus eca-miR-9064 mature miRNA
• Sequence: 41 - UUGAAGGUCCAUUGUCCACUGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545