Stem-loop eca-mir-9075

Accession

MI0028248

Description

Equus caballus eca-mir-9075 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

cuagccgcagccuggagcaccugagguagcuucccucuuggcugcucuccccucccugcucacuccgagguggugggcaaUUAGGACCAGGAUGAACAUGGAGGAgggagugagagaacccgccuugcccucgggaagugcccaa
............(((.((((((((((((((....(((((....((((((.(((((.((.(((.(((..(((..(((....)))..))).)))))).)).))))).))))))))))).....))..)).)))))))...)))))).

Structure

cuagccgcagcc   a   ---       -  --  -uucc     ggcu      c     c  c   c   ga   gg   g 
            ugg gca   ccugagg ua  gc     cucuu    gcucuc ccucc ug uca ucc  ggu  ugg c
            ||| |||   ||||||| ||  ||     |||||    |||||| ||||| || ||| |||  |||  |||  
            acc cgu   gggcucc gu  cg     gagag    ugaggg GGAGG AC AGU AGG  CCA  AUU a
-----------a   -   gaa       c  uc  cccaa     ----      A     U  A   -   -A   GG   a 

Annotation confidence Not enough data

Genome context

chr3: 17148088-17148232 [-]

Mature eca-miR-9075

• Accession: MIMAT0034620
• Description: Equus caballus eca-miR-9075 mature miRNA
• Sequence: 81 - UUAGGACCAGGAUGAACAUGGAGGA - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545