miRBase entry: eca-mir-7035

Stem-loop eca-mir-7035


Accession
MI0028284
Description
Equus caballus eca-mir-7035 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
uugggucuugcacuuccccugcucuggagggcaugcuugugggcuacucuguuuagucuaaaacccagcagagcugaaggUCCUGGUUCUGUGGCUCAGAAGCACauuccagggcugggugggagggccggacuaucuccugaug
...(((((.((.(((((((((((((((((....(((((.((((((((.......((.(((..(((((((...))))..)))..)))..)))))))))).)))))..))))))))).))).))))).)).)))))(((....))).

Structure
--------uug     u  a     -   -         ggca     g        ucuguuu  -u   aa   --    a 
           ggucu gc cuucc ccu gcucuggag    ugcuu ugggcuac       ag  cua  acc  cagc  
           ||||| || ||||| ||| |||||||||    ||||| ||||||||       ||  |||  |||  |||| g
           ucagg cg gaggg ggg cgggaccuu    ACGAA ACUCGGUG       UC  GGU  Ugg  gucg  
guaguccucua     c  g     u   u         --aC     G        -------  UU   CC   aa    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 1353795-1353939 [+]

Database links

Mature eca-miR-7035

Accession MIMAT0034654
Description Equus caballus eca-miR-7035 mature miRNA
Sequence 81 - UCCUGGUUCUGUGGCUCAGAAGCAC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545