Stem-loop eca-mir-9107

Accession

MI0028285

Description

Equus caballus eca-mir-9107 precursor miRNA

Sequence

ccagggagaggucagcagaggacccAGCCAGUGAGCUUGCCCUCUGguggcccacagcagagggcaggcuucucaggcauucaggacauuugcacagcuuugaaggu
((....((((.(..(((((...((..(((.(.((((((((((((((.((.....)).))))))))))))))..).))).....))...)))))..).))))...)).

Structure

-  aggg    g ca     gga  ---cA   A -U              g  g 
 cc    agag u  gcaga   cc     GCC G  GAGCUUGCCCUCUG ug c
 ||    |||| |  |||||   ||     ||| |  |||||||||||||| || c
 gg    uuuc a  cguuu   gg     cgg c  uucggacgggagac ac c
u  -aag    g ca     aca  acuua   a uc              g  a 

Annotation confidence Not enough data

Genome context

chr11: 953004-953110 [+]

Mature eca-miR-9107

• Accession: MIMAT0034655
• Description: Equus caballus eca-miR-9107 mature miRNA
• Sequence: 26 - AGCCAGUGAGCUUGCCCUCUG - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545