miRBase entry: eca-mir-9118

Stem-loop eca-mir-9118


Accession
MI0028298
Description
Equus caballus eca-mir-9118 precursor miRNA


Sequence

9 reads, 1 reads per million, 1 experiments
gcugggagcaaggagcuggcucccaUCACAAUUCCCACGGACUCCAGAUAcgggagaccuucuggagggcgguucguguacugagucucccugauuggugagccauuucccuucc
...(((((...((((.((((((((((((..((((.(((((((((((((...((....)).)))))).....)))))))....)))).....))).))).)))))).)))))))))

Structure
gcu     caa    c      -   -   ---CA    ---C       -----      UAc  g 
   gggag   ggag uggcuc cca UCA     AUUC    CACGGAC     UCCAGA   gg a
   |||||   |||| |||||| ||| |||     ||||    |||||||     ||||||   ||  
   ccuuc   ccuu accgag ggu agu     ugag    gugcuug     aggucu   cc g
---     ---    u      u   u   cccuc    ucau       gcggg      --u  a 


Annotation confidence Not enough data
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Genome context
chr12: 3391316-3391430 [-]

Database links

Mature eca-miR-9118

Accession MIMAT0034667
Description Equus caballus eca-miR-9118 mature miRNA
Sequence 26 - UCACAAUUCCCACGGACUCCAGAUA - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545