miRBase entry: eca-mir-9121

Stem-loop eca-mir-9121


Accession
MI0028302
Description
Equus caballus eca-mir-9121 precursor miRNA


Sequence

408 reads, 61 reads per million, 1 experiments
ugucuccaaacagccaaacagaagcaaccuggcagaugacCCUUCACGGUUUCAGGGUCUUGUACaggcuguucuacgccccuugucacugucuccugcuccgcgaggggagagaaugccggcguucugaaaaucuggagguuua
...........((((...((((((.(((((((((..(..((((((.(((...(((((....((((((((........)))...))).))....)))))..))).))))))..)...)))))).))))).....))))..))))..

Structure
ugucuccaaac    aaa    -----  c   -      -ga ga      A   UUU     UCUU  -   ---   ugu 
           agcc   caga     ag aac cuggca   u  cCCUUC CGG   CAGGG    GU ACa   ggc   u
           ||||   ||||     || ||| ||||||   |  |||||| |||   |||||    || |||   |||    
           uugg   gucu     uc uug ggccgu   a  ggggag gcc   guccu    ca ugu   ccg   c
---------au    -ag    aaaag  -   c      aag ga      c   -uc     cugu  c   ucc   cau 


Annotation confidence Not enough data
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Genome context
chr12: 10370496-10370640 [-]

Database links

Mature eca-miR-9121

Accession MIMAT0034671
Description Equus caballus eca-miR-9121 mature miRNA
Sequence 41 - CCUUCACGGUUUCAGGGUCUUGUAC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545