Stem-loop eca-mir-9128-2

Accession

MI0028312

Description

Equus caballus eca-mir-9128-2 precursor miRNA

Gene family

MIPF0002044; mir-9128

Sequence

28 reads, 2 reads per million, 1 experiments

gggagccggguggggugcugggcccugcuuccguggguuucagcucucguuggugCUGGUGCUCGCGUGGGCCACGUCACccucccuucacccuu
(((.(..(((.((((((.(((((((......(((((((.(((((.((....)).))))).))))))).))))).)).)))))))))..).)))..

Structure

--   a cc   u      c  -     ugcuuc       u     u  c 
  ggg g  ggg ggggug ug ggccc      cgugggu ucagc cu g
  ||| |  ||| |||||| || |||||      ||||||| ||||| ||  
  ccc c  ccc uccCAC GC CCGGG      GCGCUCG GGUCg gg u
uu   a uu   -      U  A     -----U       U     u  u 

Annotation confidence Not enough data

Genome context

chr13: 25353640-25353734 [+]

Mature eca-miR-9128

• Accession: MIMAT0034679
• Description: Equus caballus eca-miR-9128 mature miRNA
• Sequence: 56 - CUGGUGCUCGCGUGGGCCACGUCAC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545