Stem-loop eca-mir-9138

Accession

MI0028321

Description

Equus caballus eca-mir-9138 precursor miRNA

Sequence

cuuucuuccuccaguccuugucuuaguguccccugcuuguUUCUGGCACCGUCGCUCUGCUUUUCccccuuuggcgcaguggggaaggaaggagguucgaggcggucagggaucaucagggugauggaggauuggacugaggagg
....(((((((.(((((..(((((..(((((((((...(((((((((..(.(((((((..((((((((((.......)).))))))))..))))...))).)..)))))))))...))))).)))).))))).))))))))))))

Structure

cuuu       c     uu     ag    -     cuu         AC G   ---    GC        -  uu 
    cuuccuc agucc  gucuu  uguc cccug   guUUCUGGC  C UCG   CUCU  UUUUCccc cu  g
    ||||||| |||||  |||||  |||| |||||   |||||||||  | |||   ||||  |||||||| ||  g
    ggaggag ucagg  uagga  guag gggac   uagggacug  g agc   gagg  ggaagggg ga  c
----       -     -u     -g    u     uac         gc g   uug    aa        u  cg 

Annotation confidence Not enough data

Genome context

chr13: 12056862-12057006 [+]

Mature eca-miR-9138

• Accession: MIMAT0034689
• Description: Equus caballus eca-miR-9138 mature miRNA
• Sequence: 41 - UUCUGGCACCGUCGCUCUGCUUUUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545