miRBase entry: eca-mir-8908g-2

Stem-loop eca-mir-8908g-2


Accession
MI0028346
Description
Equus caballus eca-mir-8908g-2 precursor miRNA
Gene family
MIPF0001890; mir-8908


Sequence

497 reads, 75 reads per million, 1 experiments
ggcagauucucuacuuugagccauucugugugcagugcccUACCCAGUAAGGUACUGAUCACUUacuuagacuacaugugaucagugccugucuggguggaguaaugcucuacaagaacaacguuugggagggucuucagacu
((.(((((((((....(((((..(((((((.(((.(((.((((((((..(((((((((((((...............)))))))))))))..)))))))).))).)))..))).))))....)))))))))))))))).....

Structure
-----  c         acuu     --ca    -   -u   g   c        UA             UUacuu 
     gg agauucucu    ugagc    uucu gug  gca ugc cUACCCAG  AGGUACUGAUCAC      a
     || |||||||||    |||||    |||| |||  ||| ||| ||||||||  |||||||||||||      g
     cu ucugggagg    guuug    aaga cau  cgu aug gguggguc  uccgugacuagug      a
ucaga  -         ----     caac    a   cu   a   a        ug             uacauc 


Annotation confidence Not enough data
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Genome context
chrX: 115861091-115861233 [-]
Clustered miRNAs
19 other miRNAs are < 10 kb from eca-mir-8908g-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8908g

Accession MIMAT0034708
Description Equus caballus eca-miR-8908g mature miRNA
Sequence 41 - UACCCAGUAAGGUACUGAUCACUU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545