Stem-loop eca-mir-9173

Accession

MI0028401

Description

Equus caballus eca-mir-9173 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

uucuucccagucuucaccugaggggcuuucuucugaccugaggcagccucuucuaggcugugccccguagccgugcugcCUCACGUGAGCCUGGAUUCUGCCCagagacggagagaggcuggaauugcugagaccugggagug
...(((((((((((........((.((((((.(((.((((.(((((.....(((((((((((....(((((...)))))..)))...))))))))..)))))))).).))))))))).)).........)))).)))))))..

Structure

uuc       -    -caccugag  g      u   a -   a     ccucu        ---   cccc     c 
   uucccag ucuu         gg cuuucu cug c cug ggcag     ucuaggcu   gug    guagc  
   ||||||| ||||         || |||||| ||| | ||| |||||     ||||||||   |||    ||||| g
   gaggguc agag         uc gagaga ggc g gaC CCGUC     AGGUCCGA   CAC    cgucg  
-gu       c    ucguuaagg  g      -   a a   -     ---UU        GUG   --UC     u 

Annotation confidence Not enough data

Genome context

chr16: 1841484-1841626 [-]

Mature eca-miR-9173

• Accession: MIMAT0034753
• Description: Equus caballus eca-miR-9173 mature miRNA
• Sequence: 80 - CUCACGUGAGCCUGGAUUCUGCCC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545