Stem-loop eca-mir-6529

Accession

MI0028409

Description

Equus caballus eca-mir-6529 precursor miRNA

Gene family

MIPF0001771; mir-6529

Sequence

273 reads, 41 reads per million, 1 experiments

aaccuguucucuugagagaucagaggcgcagagugcgucaaugucagugaagCCUGUGCCUUUUACCUCUUUAAgagcgcacgguuuca
(((((((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).))))...

Structure

---    -   u       -   auc          agu  g   au 
   aacc ugu cucuuga gag   agaggcgcag   gc uca  g
   |||| ||| ||||||| |||   ||||||||||   || |||  u
   uugg acg gagAAUU CUC   UUUCCGUGUC   Cg agu  c
acu    c   c       U   CAU          ---  a   ga 

Annotation confidence Not enough data

Genome context

chr19: 38814111-38814199 [+]

Mature eca-miR-6529

• Accession: MIMAT0034760
• Description: Equus caballus eca-miR-6529 mature miRNA
• Sequence: 53 - CCUGUGCCUUUUACCUCUUUAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545