Stem-loop efu-mir-9230a

Accession

MI0028502

Description

Eptesicus fuscus efu-mir-9230a precursor miRNA

Gene family

MIPF0001949; mir-9230

Sequence

cucccaacugUUCUGAACUCCAGUUCCAGGUGAGAcucuggggacccagacucauacggggagaaacuggacugucuggcagcaggcgaaa
.((((..(((((..((..(((((((((..(((.((.(((((....))))).)).)))..)))...))))))...)).)))))..)).))..

Structure

-c  -  aa     CU  -AC      ---   AG   A  c     g 
  uc cc  cugUU  GA   UCCAGU   UCC  GUG GA ucugg g
  || ||  |||||  ||   ||||||   |||  ||| || |||||  
  ag gg  gacgg  cu   agguca   agg  cau cu agacc a
aa  c  ac     -u  guc      aag   gg   a  c     c 

Annotation confidence Not enough data

Genome context

JH977887.1: 134849-134939 [-]

Mature efu-miR-9230a

• Accession: MIMAT0034832
• Description: Eptesicus fuscus efu-miR-9230a mature miRNA
• Sequence: 11 - UUCUGAACUCCAGUUCCAGGUGAGA - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545