miRBase entry: efu-mir-99a

Stem-loop efu-mir-99a

Accession

MI0028629

Description

Eptesicus fuscus efu-mir-99a precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

ccauuggcauAAACCCGUAGAUCCGAUCUUGUGGUgaaguggaccgcacaagcucgcuucuaugggucugugucagugugg
.((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).))))))))))...

Structure

--c          A         UC   U      G  aag 
   cauuggcauA ACCCGUAGA  CGA CUUGUG Ug   u
   |||||||||| |||||||||  ||| |||||| ||    
   gugacugugu uggguaucu  gcu gaacac gc   g
ggu          c         uc   c      -  cag

Annotation confidence Not enough data

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Genome context

JH977643.1: 518687-518767 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-99a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-99a

Accession	MIMAT0034944
Description	Eptesicus fuscus efu-miR-99a mature miRNA
Sequence	11 - AAACCCGUAGAUCCGAUCUUGUGGU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545