Stem-loop efu-mir-107

Accession

MI0028639

Description

Eptesicus fuscus efu-mir-107 precursor miRNA

Gene family

MIPF0000024; mir-103

Sequence

cucucugcuuucagcuucuuuacaguguugccuuguggcauggaguucaAGCAGCAUUGUACAGGGCUAUCAAAgcacagagag
((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).))))..

Structure

--    c      --c    u  u           c   u   a 
  cucu ugcuuu   agcu cu uacaguguugc uug ggc u
  |||| ||||||   |||| || ||||||||||| ||| ||| g
  gaga acgAAA   UCGG GA AUGUUACGACG Aac uug g
ga    c      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

JH977763.1: 2838003-2838086 [+]

Mature efu-miR-107

• Accession: MIMAT0034954
• Description: Eptesicus fuscus efu-miR-107 mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUCAAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545