miRBase entry: efu-mir-1193

Stem-loop efu-mir-1193

Accession

MI0028710

Description

Eptesicus fuscus efu-mir-1193 precursor miRNA

Gene family

MIPF0000714; mir-1193

Sequence

agcugaggggAUGGUAGACCGGUGACGUGCAcuuuauuuacgauguaggucaccgguuugacuauccgucgguaccc
.(((((..((((((((((((((((((.((((............)))).))))))))))).))))))).)))))....

Structure

---a     gg       -           G    cuuua 
    gcuga  ggAUGGU AGACCGGUGAC UGCA     u
    |||||  ||||||| ||||||||||| ||||      
    uggcu  ccuauca uuuggccacug augu     u
ccca     -g       g           g    agcau

Annotation confidence Not enough data

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Genome context

JH977717.1: 862748-862824 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from efu-mir-1193

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-1193

Accession	MIMAT0035025
Description	Eptesicus fuscus efu-miR-1193 mature miRNA
Sequence	11 - AUGGUAGACCGGUGACGUGCA - 31
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545