miRBase entry: efu-mir-494

Stem-loop efu-mir-494

Accession

MI0028713

Description

Eptesicus fuscus efu-mir-494 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

cucgaaggagagguuguccgugauguguucucuuuauugaugaUGAAACAUACACGGGAAACCUCUuuuuuaguau
...((((((((((((.((((((.((((((.((.(((....))).)))))))))))))).)))))))))))).....

Structure

--cuc            g      a      c  u   u 
     gaaggagagguu uccgug uguguu uc uua u
     |||||||||||| |||||| |||||| || |||  
     uuuuuUCUCCAA GGGCAC AUACAA AG agu g
uauga            A      -      -  U   a

Annotation confidence Not enough data

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Genome context

JH977717.1: 863147-863222 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from efu-mir-494

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-494

Accession	MIMAT0035028
Description	Eptesicus fuscus efu-miR-494 mature miRNA
Sequence	44 - UGAAACAUACACGGGAAACCUCU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545