miRBase entry: efu-mir-411

Stem-loop efu-mir-411

Accession

MI0028714

Description

Eptesicus fuscus efu-mir-411 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

auguggagagACGGUGGACCGUAGAGCAUGCGUGccauuugugacguaugugcuaugguccacucauucucggcauca
((((.(((((..((((((((((((.((((((((..(....)..)))))))).))))))))))))..))))).))))..

Structure

--    g     AC            A        Gc a 
  augu gagag  GGUGGACCGUAG GCAUGCGU  c u
  |||| |||||  |||||||||||| ||||||||  |  
  uacg cucuu  ucaccugguauc uguaugca  g u
ac    g     ac            g        gu u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH977717.1: 866940-867017 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from efu-mir-411

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-411

Accession	MIMAT0035029
Description	Eptesicus fuscus efu-miR-411 mature miRNA
Sequence	11 - ACGGUGGACCGUAGAGCAUGCGUG - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545