Stem-loop efu-mir-487

Accession

MI0028727

Description

Eptesicus fuscus efu-mir-487 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uacuugaagaGUGGUUAUCCCUGCUGUGUUCGcuguauuugugacgaaucauacagggacauccaguuuuucaguauc
((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))..

Structure

--    u     G   UUA      C    -    - ugu 
  uacu gaaga UGG   UCCCUG UGUG UUCG c   a
  |||| ||||| |||   |||||| |||| |||| |   u
  auga uuuuu acc   agggac auac aagc g   u
cu    c     g   uac      -    u    a ugu 

Annotation confidence Not enough data

Genome context

JH977717.1: 845018-845095 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from efu-mir-487

Mature efu-miR-487

• Accession: MIMAT0035042
• Description: Eptesicus fuscus efu-miR-487 mature miRNA
• Sequence: 11 - GUGGUUAUCCCUGCUGUGUUCG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545