miRBase entry: efu-mir-9186c

Stem-loop efu-mir-9186c

Accession

MI0028788

Description

Eptesicus fuscus efu-mir-9186c precursor miRNA

Gene family

MIPF0001868; mir-9186

Sequence

agagugagggaggcggaauggcugguacugaaguaaugacugcacacAGUACCAGACAUGCCGCCCCCuucccucuac
((((.(((((.(((((.(((.(((((((((..(((.....)))...))))))))).))).))))).))))).))))..

Structure

--    u     a     a   g         -aa   a 
  agag gaggg ggcgg aug cugguacug   gua u
  |||| ||||| ||||| ||| |||||||||   ||| g
  ucuc cuuCC CCGCC UAC GACCAUGAc   cgu a
ca    c     C     G   A         aca   c

Annotation confidence Not enough data

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Genome context

JH977721.1: 16583-16660 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9186c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9186c

Accession	MIMAT0035095
Description	Eptesicus fuscus efu-miR-9186c mature miRNA
Sequence	48 - AGUACCAGACAUGCCGCCCCC - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545