miRBase entry: efu-mir-424

Stem-loop efu-mir-424

Accession

MI0028827

Description

Eptesicus fuscus efu-mir-424 precursor miRNA

Gene family

MIPF0000164; mir-322

Sequence

cuaggggauaCAGCAGCAAUUCAUGUUUUGAAguucuuuacaaugguucaaaacgugaggcgcugcuauacccccucgag
..(((((.((.((((((..(((((((((((((.(..........).)))))))))))))..)))))).)).)))))....

Structure

--cu     a  C      AA             g ucuu 
    agggg ua AGCAGC  UUCAUGUUUUGAA u    u
    ||||| || ||||||  ||||||||||||| |     
    ucccc au ucgucg  gagugcaaaacuu g    a
gagc     c  a      cg             g uaac

Annotation confidence Not enough data

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Genome context

JH977765.1: 652615-652694 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-424

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-424

Accession	MIMAT0035126
Description	Eptesicus fuscus efu-miR-424 mature miRNA
Sequence	11 - CAGCAGCAAUUCAUGUUUUGAA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545