miRBase entry: efu-mir-133-2

Stem-loop efu-mir-133-2

Accession

MI0028830

Description

Eptesicus fuscus efu-mir-133-2 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

gcuuugcuagAGCUGGUAAAAUGGAACCAAAUCgccucuucaauggaUUUGGUCCCCUUCAACCAGCUGUAgcuaugcauu
((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))...

Structure

---  uuu    g       AA  U  A        gccuc 
   gc   gcua AGCUGGU  AA GG ACCAAAUC     u
   ||   |||| |||||||  || || ||||||||      
   cg   cgAU UCGACCA  UU CC UGGUUUag     u
uua  uau    G       AC  C  C        guaac

Annotation confidence Not enough data

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Genome context

JH977615.1: 27067121-27067201 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-133-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-133-5p

Accession	MIMAT0035044
Description	Eptesicus fuscus efu-miR-133-5p mature miRNA
Sequence	11 - AGCUGGUAAAAUGGAACCAAAUC - 33
Evidence	experimental Illumina [1]

Mature efu-miR-133-3p

Accession	MIMAT0035045
Description	Eptesicus fuscus efu-miR-133-3p mature miRNA
Sequence	48 - UUUGGUCCCCUUCAACCAGCUGUA - 71
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545