Stem-loop xtr-mir-551b

Accession

MI0029370

Description

Xenopus tropicalis xtr-mir-551b precursor miRNA

Sequence

ugaccuuagaaaucaagcuuggguuagaccugguucuuauacacugaGGCGACCCAUACUUGGUUUCUgaggcugaagug
...((((((((((((((..((((((.(.((((((........))).))))))))))..))))))))))))))........

Structure

-----uga              cu      a a   -   ucu 
        ccuuagaaaucaag  uggguu g ccu ggu   u
        ||||||||||||||  |||||| | ||| |||    
        ggagUCUUUGGUUC  ACCCAG C GGa uca   a
gugaaguc              AU      - -   g   cau 

Annotation confidence Not enough data

Genome context

chr5: 101175007-101175086 [-]

Mature xtr-miR-551b-3p

• Accession: MIMAT0037593
• Description: Xenopus tropicalis xtr-miR-551b-3p mature miRNA
• Sequence: 48 - GGCGACCCAUACUUGGUUUCU - 68
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196