Stem-loop tae-MIR5175

Accession

MI0030402

Description

Triticum aestivum tae-MIR5175 precursor miRNA

Literature search

2 open access papers mention tae-MIR5175
(14 sentences)

Sequence

28469 reads, 221 reads per million, 116 experiments

acucccucugUUCCAAAUUACUCGUCGUGGUuuuaguccaaauuugaacuaaaaccaugacgaguaauuuggaacggagggagua
(((((((((((((((((((((((((((((((((((((.((....)).))))))))))))))))))))))))))))))))))))).

Structure

-                                     c  a 
 acucccucugUUCCAAAUUACUCGUCGUGGUuuuagu ca a
 ||||||||||||||||||||||||||||||||||||| ||  
 ugagggaggcaagguuuaaugagcaguaccaaaauca gu u
a                                     a  u 

Annotation confidence Not enough data

Genome context

2A: 152624513-152624597 [-]

Mature tae-miR5175-5p

• Accession: MIMAT0035792
• Description: Triticum aestivum tae-miR5175-5p mature miRNA
• Sequence: 11 - UUCCAAAUUACUCGUCGUGGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289