miRBase entry: 24734873

Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)

PubMed ID 24734873
Authors Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
Journal BMC Genomics
Volume 15
Pages 289

There are 275 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
tae-MIR1122b MI0030368 96 5D 123186454 123186621 + -
tae-MIR9652 MI0030369 413 2D 143094648 143094771 - High
tae-MIR9653a MI0030370 38 None None -
tae-MIR9654a MI0030371 24 3B 773196382 773196487 - -
tae-MIR9655 MI0030372 44 None None High
tae-MIR9656 MI0030373 3334 6D 169013707 169013836 - -
tae-MIR9654b MI0030374 41 None None Low
tae-MIR9657a MI0030375 213 3B 720238412 720238489 - -
tae-MIR9658 MI0030376 48 None None Low
tae-MIR9659 MI0030377 1 None None -
tae-MIR9660 MI0030378 33 6B 190032403 190032492 - -
tae-MIR1127b MI0030379 90 2A 6474469 6474595 + -
tae-MIR9661 MI0030380 1 None None -
tae-MIR396 MI0030381 115 None None -
tae-MIR9662a MI0030382 18163 6A 54567486 54567582 + -
tae-MIR9663 MI0030383 2454 6B 12097776 12097877 + -
tae-MIR1137b MI0030384 46 None None High
tae-MIR9664 MI0030385 154 1B 141665392 141665509 - -
tae-MIR9665 MI0030386 5 None None -
tae-MIR2275 MI0030387 3 None None -
tae-MIR9666a MI0030388 148 None None High
tae-MIR9667 MI0030389 0 7B 13254527 13254617 - -
tae-MIR9662b MI0030390 18163 None None -
tae-MIR5062 MI0030391 178 None None High
tae-MIR9668 MI0030392 1722 None None -
tae-MIR9669 MI0030393 1387 None None -
tae-MIR9666c MI0030394 26 None None High
tae-MIR9670 MI0030395 2986 6D 50938062 50938139 - High
tae-MIR1847 MI0030396 239 None None -
tae-MIR9671 MI0030397 1 2A 2576016 2576114 + -
tae-MIR1122c MI0030398 107 3D 86881594 86881689 + -
tae-MIR167c MI0030399 6035 6D 53810988 53811134 + High
tae-MIR9672a MI0030400 1054 5A 67467149 67467293 + -
tae-MIR9673 MI0030401 36 None None -
tae-MIR5175 MI0030402 221 2A 152624513 152624597 - -
tae-MIR9674a MI0030403 7442 None None -
tae-MIR1120b MI0030404 651 7B 15312620 15312712 + -
tae-MIR397 MI0030405 404 6A 120354266 120354358 - High
tae-MIR1130b MI0030406 121 3B 661444562 661444669 + Low
tae-MIR5384 MI0030407 147 1A 15633879 15633944 - High
tae-MIR9675 MI0030408 96 None None -
tae-MIR1120c MI0030409 188 3D 73734313 73734386 + Low
tae-MIR7757 MI0030410 1490 3D 111891336 111891679 - Low
tae-MIR9674b MI0030411 5649 None None -
tae-MIR9676 MI0030412 1376 3B 200808878 200808995 + -
tae-MIR5048 MI0030413 12973 None None High
tae-MIR9677a MI0030414 45 None None -
tae-MIR9678 MI0030415 1 7D 232631192 232631286 - -
tae-MIR6197 MI0030416 29 1A 142658741 142658831 - High
tae-MIR9657c MI0030417 181 None None -
tae-MIR9679 MI0030418 54 2D 26660550 26660638 - -
tae-MIR5049 MI0030419 210 None None -
tae-MIR9657b MI0030420 101 None None High
tae-MIR9666b MI0030421 488 2A 251249264 251249361 - High
osa-MIR156a MI0000653 257272 Chr1 22524147 22524246 - -
osa-MIR156b MI0000654 258339 Chr1 4666341 4666516 + High
osa-MIR156c MI0000655 258287 Chr1 4665975 4666123 + High
osa-MIR156d MI0000656 375099 Chr2 4512884 4513012 - -
osa-MIR156e MI0000657 257257 Chr4 25026327 25026430 - -
osa-MIR156f MI0000658 374943 Chr8 21478230 21478415 + High
osa-MIR156g MI0000659 258296 Chr9 15065253 15065368 + High
osa-MIR156h MI0000660 374943 Chr8 21491232 21491417 + High
osa-MIR156i MI0000661 257274 Chr2 24119995 24120084 - -
osa-MIR156j MI0000662 374978 Chr6 26554795 26554959 + High
osa-MIR160a MI0000663 392 Chr2 3511585 3511672 - High
osa-MIR160b MI0000664 392 Chr6 28081020 28081158 + High
osa-MIR160c MI0000665 321 Chr8 1707568 1707666 + High
osa-MIR160d MI0000666 299 Chr3 32454988 32455129 + -
osa-MIR164a MI0000668 1892 Chr7 28523341 28523496 - -
osa-MIR164b MI0000669 1921 Chr5 15896163 15896271 - -
osa-MIR166a MI0000670 19323 Chr10 19987135 19987279 + High
osa-MIR166b MI0000671 19371 Chr6 30327084 30327289 - High
osa-MIR166c MI0000672 19151 Chr3 3487788 3487912 + High
osa-MIR166d MI0000673 19377 Chr2 26130059 26130183 + High
osa-MIR166e MI0000674 36 Chr3 765724 765860 + -
osa-MIR166f MI0000675 19281 Chr10 14483290 14483396 - -
osa-MIR167a MI0000676 55831 Chr12 25476808 25476948 + High
osa-MIR167b MI0000677 55818 Chr3 30546928 30547090 - -
osa-MIR167c MI0000678 55830 Chr3 33130619 33130781 + -
osa-MIR169a MI0000679 3953 Chr1 8729104 8729276 + -
osa-MIR396a MI0001046 97 Chr2 34280384 34280537 + -
osa-MIR396b MI0001047 100 Chr6 3669649 3669764 + -
osa-MIR396c MI0001048 280 Chr2 34287873 34288013 - High
osa-MIR397a MI0001049 361 Chr6 28489785 28489898 + -
osa-MIR397b MI0001050 315 Chr2 3280781 3280898 - -
osa-MIR398a MI0001051 11 Chr10 9216250 9216364 - -
osa-MIR398b MI0001052 59 Chr7 14598617 14598704 - -
osa-MIR156k MI0001090 871 Chr9 18289107 18289212 - -
osa-MIR156l MI0001091 10220 Chr5 5230609 5230764 + High
osa-MIR159a MI0001092 1717 Chr1 17681923 17682194 + -
osa-MIR159b MI0001093 1371 Chr1 1215030 1215217 + -
osa-MIR159c MI0001094 62 Chr1 6556048 6556244 - -
osa-MIR159d MI0001095 44 Chr1 6563756 6563944 - -
osa-MIR159e MI0001096 46 Chr1 9760708 9760898 - -
osa-MIR159f MI0001097 83 Chr1 6693112 6693299 + -
osa-MIR160e MI0001100 284 Chr7 2216761 2216874 - -
osa-MIR160f MI0001101 73 Chr8 24396882 24396981 + -
osa-MIR164c MI0001103 8 Chr5 17327440 17327558 + -
osa-MIR164d MI0001104 2213 Chr2 33143567 33143660 - -
osa-MIR164e MI0001105 1894 Chr3 10542157 10542288 + -
osa-MIR166k MI0001107 1477 Chr2 32435003 32435129 - High
osa-MIR166l MI0001108 1522 Chr9 16951817 16951933 + High
osa-MIR167d MI0001109 56522 Chr7 4166295 4166404 - -
osa-MIR167e MI0001110 56102 Chr2 3742241 3742513 - High
osa-MIR167f MI0001111 56422 Chr10 14723044 14723156 - -
osa-MIR167g MI0001112 56505 Chr3 3347682 3347763 + High
osa-MIR167h MI0001113 56418 Chr12 25480618 25480737 + -
osa-MIR167i MI0001114 56192 Chr6 27674749 27674949 + High
osa-MIR168a MI0001115 282915 Chr2 1553154 1553240 - High
osa-MIR168b MI0001116 1 Chr2 27336428 27336533 + -
osa-MIR169b MI0001117 3267 Chr6 27295908 27296035 - -
osa-MIR169c MI0001118 3454 Chr4 30712338 30712449 - -
osa-MIR169d MI0001119 1 Chr9 14620382 14620484 - -
osa-MIR169e MI0001120 804 Chr2 31205866 31205997 - -
osa-MIR169f MI0001121 845 Chr2 18558299 18558512 - -
osa-MIR169g MI0001122 1008 Chr4 19420077 19420202 + -
osa-MIR169h MI0001123 1003 Chr8 26807349 26807470 + -
osa-MIR169i MI0001124 1053 Chr8 26803116 26803291 + High
osa-MIR169j MI0001125 1011 Chr9 19788861 19788985 + -
osa-MIR169k MI0001126 1016 Chr9 19792133 19792288 + -
osa-MIR169l MI0001127 1003 Chr8 26817488 26817595 + -
osa-MIR169m MI0001128 1012 Chr8 26813897 26814034 + -
osa-MIR169n MI0001129 82 Chr11 6085252 6085428 - -
osa-MIR169o MI0001130 82 Chr11 6081528 6081700 - -
osa-MIR169p MI0001131 0 Chr8 7641327 7641452 - -
osa-MIR169q MI0001132 None Chr8 26817488 26817595 - -
osa-MIR171b MI0001133 363 Chr8 5369153 5369252 + -
osa-MIR172a MI0001139 3477 Chr9 22881834 22881942 + -
osa-MIR172b MI0001140 201 Chr1 42923736 42923973 - -
osa-MIR172c MI0001141 199 Chr7 13111485 13111595 - -
osa-MIR166g MI0001142 19256 Chr12 18329367 18329511 + -
osa-MIR166h MI0001143 17849 Chr2 32435174 32435292 - High
osa-MIR166i MI0001144 443 Chr3 25294953 25295097 + -
osa-MIR172d MI0001154 3505 Chr2 35143537 35143666 - High
osa-MIR167j MI0001156 56523 Chr1 32686068 32686227 - -
osa-MIR166m MI0001157 17946 Chr8 23045356 23045555 + -
osa-MIR166j MI0001158 19511 None None -
osa-MIR164f MI0001159 1904 Chr5 23343908 23344117 + -
zma-MIR156d MI0001456 207336 chr5 94725847 94725965 - High
zma-MIR156f MI0001457 135637 chr2 185613978 185614144 - High
zma-MIR156g MI0001458 130978 chr7 119411284 119411404 + High
zma-MIR156b MI0001459 201162 chr3 6928278 6928401 - -
zma-MIR156c MI0001460 129128 None None -
zma-MIR156e MI0001461 132496 chr2 33005026 33005151 + High
zma-MIR156a MI0001462 130538 chr4 87069146 87069297 - -
zma-MIR156h MI0001463 133708 chr10 129642870 129642984 - -
zma-MIR156i MI0001464 134769 chr4 140280587 140280703 - High
zma-MIR160a MI0001465 1707 chr4 241638522 241638625 + -
zma-MIR160c MI0001466 2127 chr6 9551862 9551961 + -
zma-MIR160d MI0001467 2388 chr1 288700634 288700775 - -
zma-MIR160b MI0001468 1502 chr5 44296768 44296888 - High
zma-MIR164a MI0001469 2975 chr2 223401157 223401308 - -
zma-MIR164d MI0001470 2975 chr7 178154786 178155001 + -
zma-MIR164b MI0001471 3176 chr6 145727415 145727542 + -
zma-MIR164c MI0001472 11750 chr6 157477837 157478106 + Low
zma-MIR169a MI0001473 2201 chr3 37346686 37346815 + -
zma-MIR169b MI0001474 1649 chr8 5012331 5012486 - -
zma-MIR167a MI0001475 46848 chr3 119392621 119392810 + -
zma-MIR167b MI0001476 49044 chr5 7976369 7976495 + -
zma-MIR167d MI0001477 48117 chr1 292918639 292918771 - -
zma-MIR167c MI0001478 48528 chr5 4414244 4414375 + High
zma-MIR160e MI0001479 1755 None None -
zma-MIR166a MI0001480 353330 chr6 87381728 87381940 + High
zma-MIR166h MI0001482 356574 chr1 279585912 279585987 - -
zma-MIR166e MI0001483 350283 chr5 195602244 195602330 + -
zma-MIR166i MI0001485 353816 chr1 244940015 244940097 + High
zma-MIR166f MI0001486 356623 chr5 8289186 8289263 + -
zma-MIR166g MI0001487 362638 chr1 13782628 13782753 + High
zma-MIR166b MI0001488 349995 chr1 226759256 226759371 - High
zma-MIR166c MI0001489 350268 chr4 153858453 153858544 + -
zma-MIR166d MI0001490 349994 chr5 22443534 22443637 - High
zma-MIR171b MI0001492 5349 chr5 223360741 223360825 - High
zma-MIR172a MI0001493 5343 chr7 54276707 54276789 - -
zma-MIR172d MI0001494 5334 chr6 172029786 172029859 + -
zma-MIR172b MI0001495 5334 chr5 221721349 221721474 - -
zma-MIR172c MI0001496 5389 chr4 174154928 174155050 + High
osa-MIR396e MI0001703 1338 Chr4 34436820 34437003 + High
zma-MIR396b MI0001800 2076 chr9 15122740 15122875 - -
zma-MIR396a MI0001801 3766 chr4 176326883 176327019 + Low
zma-MIR156j MI0001808 1457 chr7 134663764 134663888 - -
zma-MIR159a MI0001809 17754 chr8 10753073 10753318 + High
zma-MIR159b MI0001810 27471 chr8 10950933 10951153 + -
zma-MIR159c MI0001811 1799 chr3 2020760 2020976 - -
zma-MIR159d MI0001812 1381 chr8 27675686 27675902 + -
zma-MIR166k MI0001817 67163 chr5 216483766 216483933 - High
zma-MIR166j MI0001818 68413 chr7 128589394 128589547 + High
zma-MIR167e MI0001819 51583 chr7 10115799 10115917 - High
zma-MIR167f MI0001820 48626 chr3 195044719 195044837 + -
zma-MIR167g MI0001821 52881 chr3 119394584 119394826 + -
zma-MIR167h MI0001822 54132 chr6 95985872 95986014 - High
zma-MIR167i MI0001823 55558 chr9 113476123 113476252 + High
zma-MIR168a MI0001824 151808 chr5 76534928 76535031 - Low
zma-MIR168b MI0001825 151163 chr4 244520636 244520739 - High
zma-MIR169c MI0001826 16201 chr2 11553338 11553471 + -
zma-MIR169f MI0001827 1983 chr5 168617435 168617584 + -
zma-MIR169g MI0001828 1754 chr2 67281149 67281288 + -
zma-MIR169h MI0001829 1280 chr4 49625355 49625482 + -
zma-MIR169i MI0001830 2459 chr4 49299338 49299528 + -
zma-MIR169k MI0001831 2351 chr7 142286603 142286735 + -
zma-MIR169j MI0001832 2595 chr2 198435908 198436058 + High
zma-MIR169d MI0001833 444 chr4 49565639 49565766 - -
zma-MIR169e MI0001834 444 chr4 49625356 49625483 - -
zma-MIR172e MI0001840 2028 chr3 145801592 145801765 + -
zma-MIR166l MI0001841 348977 chr3 91435335 91435471 + High
zma-MIR166m MI0001842 347901 chr5 216484037 216484192 - High
zma-MIR156k MI0001847 9178 chr6 98967260 98967382 - -
zma-MIR160f MI0001848 1329 chr2 241093436 241093551 - -
tae-MIR159a MI0006170 705805 3D 840138 840314 - High
tae-MIR159b MI0006171 704970 None None -
tae-MIR160 MI0006172 41 5B 233412448 233412594 + -
tae-MIR164 MI0006173 32 None None -
tae-MIR167a MI0006174 5585 None None -
tae-MIR1127a MI0006189 227 4B 126057135 126057285 + Low
osa-MIR169r MI0006973 69 Chr3 35782416 35782544 + High
osa-MIR396f MI0010563 1410 Chr2 35636546 35636721 - High
zma-MIR396c MI0010569 8272 chr2 1951700 1951773 - -
zma-MIR396d MI0010570 9235 chr10 148727703 148727776 + -
osa-MIR2275a MI0011269 1 Chr8 1204975 1205135 + -
osa-MIR2275b MI0011270 None Chr8 1202490 1202589 + -
zma-MIR2275a MI0011278 1336 chr4 31733907 31734028 + -
zma-MIR2275b MI0011279 454 chr4 31734063 31734144 + -
zma-MIR2275c MI0011280 328 chr10 70573557 70573793 + -
zma-MIR2275d MI0011281 0 chr2 207980073 207980192 + -
osa-MIR396g MI0013047 1122 Chr6 5300630 5300810 - -
osa-MIR396h MI0013048 1122 Chr2 32841661 32841801 + -
osa-MIR396d MI0013049 1542 None None -
zma-MIR156l MI0013184 131948 chr5 188595332 188595421 - High
zma-MIR159e MI0013185 3823 chr1 249664337 249664463 - -
zma-MIR159f MI0013186 15434 chr3 25007834 25008048 - High
zma-MIR159g MI0013187 1245 None None -
zma-MIR159h MI0013188 216 chr8 10885935 10886134 + -
zma-MIR159i MI0013189 1245 chr8 10912332 10912583 + -
zma-MIR159j MI0013190 20514 chr8 10920901 10921152 + -
zma-MIR159k MI0013191 19488 chr8 10947058 10947257 + -
zma-MIR160g MI0013192 1537 chr6 94036699 94036784 + High
zma-MIR164e MI0013193 3520 chr1 47137796 47137911 + -
zma-MIR164f MI0013194 2839 chr4 179535508 179535615 + -
zma-MIR164g MI0013195 3844 chr6 142646355 142646525 - -
zma-MIR164h MI0013196 9316 chr8 121773384 121773602 + -
zma-MIR166n MI0013197 66413 chr4 181112182 181112277 + High
zma-MIR167j MI0013198 46365 chr1 12791799 12791907 + High
zma-MIR169l MI0013199 0 chr1 303772025 303772113 + -
zma-MIR169m MI0013200 491 chr3 102365461 102365561 + -
zma-MIR169n MI0013201 6 chr3 233919759 233919862 + -
zma-MIR169o MI0013202 1048 chr4 13818178 13818315 + -
zma-MIR169p MI0013203 1338 chr7 114375728 114375792 - -
zma-MIR169q MI0013204 40 chr8 130375286 130375391 + -
zma-MIR169r MI0013205 758 chr9 111791259 111791384 - -
zma-MIR396e MI0013225 2446 chr4 176331864 176332029 - High
zma-MIR396f MI0013226 1888 chr5 220211653 220211769 + High
zma-MIR396g MI0013227 0 chr5 220222148 220222261 + -
zma-MIR396h MI0013228 0 chr9 15122758 15122881 + -
zma-MIR397a MI0013229 149 chr3 183569171 183569313 - -
zma-MIR397b MI0013230 1114 chr5 84610591 84610674 - -
zma-MIR398a MI0013231 184 chr2 174319898 174320037 + -
zma-MIR398b MI0013232 901 chr7 39887938 39888045 + -
hvu-MIR156a MI0016449 None None None -
tae-MIR156 MI0016450 418 None None -
hvu-MIR159b MI0016451 None None None -
hvu-MIR159a MI0016452 None BACC01000259.1 1889 2066 + -
hvu-MIR166a MI0016455 None None None -
tae-MIR167b MI0016456 6 None None -
hvu-MIR168 MI0016457 None None None -
hvu-MIR169 MI0016459 None None None -
tae-MIR169 MI0016460 48 None None -
hvu-MIR397a MI0016465 None None None -
tae-MIR398 MI0016466 8629 3B 662632381 662632500 + High
tae-MIR171b MI0016468 46 2D 132845309 132845446 - -
hvu-MIR166b MI0016742 None None None -
hvu-MIR166c MI0018212 None None None -
osa-MIR2275c MI0019032 0 Chr7 16719772 16719880 - -
osa-MIR2275d MI0019043 0 Chr8 3736806 3736932 - -
hvu-MIR397b MI0030545 None None None -
hvu-MIR156b MI0030546 None None None -
tae-MIR9653b MI0031538 264 1D 134547683 134547742 + -



Comments or questions? Email mirbase@manchester.ac.uk