Stem-loop tae-MIR9657c

Accession

MI0030417

Description

Triticum aestivum tae-MIR9657c precursor miRNA

Literature search

1 open access papers mention tae-MIR9657c
(1 sentences)

Sequence

55709 reads, 1405.0 reads per million, 204 experiments

gcauagcggagggcuggcucCGUUCGCCGGAGAAGCAUGuuguggaccagugccgCGUGCUUCCUCGUCGAACGGUggcgaccauguugcacgcgc
((...((((..((.(.((((((((((.(((.(((((((((.(((......))).))))))))).))).))))))).))).)))...))))..))..

Structure

--  aua    -ag  c g   -       C   A         u   ga 
  gc   gcgg   gg u gcu cCGUUCG CGG GAAGCAUGu gug  c
  ||   ||||   || | ||| ||||||| ||| ||||||||| |||   
  cg   cguu   cc a cgg GGCAAGC GCU CUUCGUGCg cgu  c
cg  -ca    gua  - g   U       U   C         c   ga 

Annotation confidence High

Genome context

Unknown

Mature tae-miR9657c-5p

• Accession: MIMAT0056541
• Description: Triticum aestivum tae-miR9657c-5p mature miRNA
• Sequence: 21 - CGUUCGCCGGAGAAGCAUG - 39
• Evidence: experimental ; unknown

Mature tae-miR9657c-3p

• Accession: MIMAT0035807
• Description: Triticum aestivum tae-miR9657c-3p mature miRNA
• Sequence: 56 - CGUGCUUCCUCGUCGAACGGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289