Stem-loop tae-MIR9666b

Accession

MI0030421

Description

Triticum aestivum tae-MIR9666b precursor miRNA

Literature search

2 open access papers mention tae-MIR9666b
(4 sentences)

Sequence

88713 reads, 488 reads per million, 116 experiments

ucauucggauucGCCAUCAUACGUCCAACCGUGcauuugauaugcauauauaugcaucacgagccaCGGUUGGGCUGUAUGAUGGCGAuaccgauugg
.((.((((..(((((((((((((((((((((((..((((..((((((....))))))..)))).))))))))))).))))))))))))..)))).)).

Structure

u  u    au            -           ca    au      a 
 ca ucgg  ucGCCAUCAUAC GUCCAACCGUG  uuug  augcau u
 || ||||  |||||||||||| |||||||||||  ||||  ||||||  
 gu agcc  AGCGGUAGUAUG CGGGUUGGCac  gagc  uacgua a
g  u    au            U           -c    ac      u 

Annotation confidence High

Genome context

2A: 251249264-251249361 [-]

Mature tae-miR9666b-5p

• Accession: MIMAT0035812
• Description: Triticum aestivum tae-miR9666b-5p mature miRNA
• Sequence: 13 - GCCAUCAUACGUCCAACCGUG - 33
• Evidence: experimental ; Illumina [1]

Mature tae-miR9666b-3p

• Accession: MIMAT0035813
• Description: Triticum aestivum tae-miR9666b-3p mature miRNA
• Sequence: 67 - CGGUUGGGCUGUAUGAUGGCGA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289