Stem-loop zma-MIR169g

Accession

MI0001828

Description

Zea mays zma-MIR169g precursor miRNA

Literature search

33 open access papers mention zma-MIR169g
(216 sentences)

Sequence

1864 reads, 3334.0 reads per million, 113 experiments

cagagcuagccugccucuggUAGCCAAGGAUGACUUGCCUAcauggucucgcuaguuccgguuguugcaugcaugccacuaugccaguccugcugggUUUGUGGGCGGUCUCCUUGGCUAGCcugaguggcucuugccug
(((.((.((((...(((.((((((((((((.((((.(((((((....((((.(((..(.(((.((.(((....))).))...))).)..))).))))..)))))))))))))))))))).))).))).))))...)))))

Structure

   a  --u    ugc   u   -         U    U       uggu    c   uu c   --u  u   u 
cag gc   agcc   cuc ggU AGCCAAGGA GACU GCCUAca    cucg uag  c ggu   gu gca g
||| ||   ||||   ||| ||| ||||||||| |||| |||||||    |||| |||  | |||   || |||  
guc cg   ucgg   gag cCG UCGGUUCCU CUGG CGGGUGU    gggu guc  g ccg   ca cgu c
   -  uuc    --u   u   A         -    -       --UU    c   cu a   uau  c   a 

Annotation confidence Low

Genome context

2: 67762521-67762660 [+]

Mature zma-miR169g-5p

• Accession: MIMAT0001730
• Description: Zea mays zma-miR169g-5p mature miRNA
• Sequence: 21 - UAGCCAAGGAUGACUUGCCUA - 41
• Evidence: not_experimental

Mature zma-miR169g-3p

• Accession: MIMAT0056565
• Description: Zea mays zma-miR169g-3p mature miRNA
• Sequence: 98 - UUUGUGGGCGGUCUCCUUGGCUAGC - 122
• Evidence: experimental ; unknown

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13