Stem-loop zma-MIR169g

Accession

MI0001828

Description

Zea mays zma-MIR169g precursor miRNA

Literature search

30 open access papers mention zma-MIR169g
(218 sentences)

Sequence

308 reads, 1754 reads per million, 10 experiments

cagagcuagccugccucuggUAGCCAAGGAUGACUUGCCUAcauggucucgcuaguuccgguuguugcaugcaugccacuaugccaguccugcuggguuugugggcggucuccuuggcuagccugaguggcucuugccug
(((.((.((((...(((.((((((((((((.((((.(((((((....((((.(((..(.(((.((.(((....))).))...))).)..))).))))..)))))))))))))))))))).))).))).))))...)))))

Structure

   a  --u    ugc   u   -         U    U       uggu    c   uu c   --u  u   u 
cag gc   agcc   cuc ggU AGCCAAGGA GACU GCCUAca    cucg uag  c ggu   gu gca g
||| ||   ||||   ||| ||| ||||||||| |||| |||||||    |||| |||  | |||   || |||  
guc cg   ucgg   gag ccg ucgguuccu cugg cgggugu    gggu guc  g ccg   ca cgu c
   -  uuc    --u   u   a         -    -       --uu    c   cu a   uau  c   a 

Annotation confidence Not enough data

Genome context

chr2: 67281149-67281288 [+]

Mature zma-miR169g

• Accession: MIMAT0001730
• Description: Zea mays zma-miR169g mature miRNA
• Sequence: 21 - UAGCCAAGGAUGACUUGCCUA - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13