Stem-loop tae-MIR9660

Accession

MI0030378

Description

Triticum aestivum tae-MIR9660 precursor miRNA

Literature search

1 open access papers mention tae-MIR9660
(1 sentences)

Sequence

8037 reads, 203.0 reads per million, 211 experiments

gcucuuucucUUGCGAGCAACGGAUGAAUCagccuuguuauccaauccagagguggcugaUUUCUCCUUUGCUCGAGUAGAGaaagagua
(((((((((((..(((((((.(((.(((((((((....................))))))))).))).)))))))...))))))))))).

Structure

-           -UG       C   U         uuguuaucc 
 gcucuuucucU   CGAGCAA GGA GAAUCagcc         a
 |||||||||||   ||||||| ||| |||||||||          
 ugagaaaGAGA   GCUCGUU CCU UUUagucgg         a
a           UGA       U   C         uggagaccu 

Annotation confidence Medium

Genome context

6B: 190032403-190032492 [-]

Mature tae-miR9660-5p

• Accession: MIMAT0035768
• Description: Triticum aestivum tae-miR9660-5p mature miRNA
• Sequence: 11 - UUGCGAGCAACGGAUGAAUC - 30
• Evidence: experimental ; Illumina [1]

Mature tae-miR9660-3p

• Accession: MIMAT0056514
• Description: Triticum aestivum tae-miR9660-3p mature miRNA
• Sequence: 61 - UUUCUCCUUUGCUCGAGUAGAG - 82
• Evidence: experimental ; unknown

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289