Stem-loop tae-MIR9653a

Accession

MI0030370

Description

Triticum aestivum tae-MIR9653a precursor miRNA

Literature search

2 open access papers mention tae-MIR9653a
(14 sentences)

Sequence

654898 reads, 24123.0 reads per million, 207 experiments

ccaucgcuuugguucccaggCCAUGGCCAAGGUCUCGUGagguucgcgugaccUUUGAGACUUUGGCCAUGGCCaugguggccauggcauguug
.(((.(((.(((((.((((((((((((((((((((((.((((((.....))))))))))))))))))))))))).))).))))).))))))...

Structure

--c   c   u     c   -                   U      c 
   cau gcu ugguu cca ggCCAUGGCCAAGGUCUCG Gagguu g
   ||| ||| ||||| ||| ||||||||||||||||||| |||||| c
   gua cgg accgg ggu CCGGUACCGGUUUCAGAGU UUccag g
guu   -   u     u   a                   -      u 

Annotation confidence Medium

Genome context

Unknown

Mature tae-miR9653a-5p

• Accession: MIMAT0056507
• Description: Triticum aestivum tae-miR9653a-5p mature miRNA
• Sequence: 21 - CCAUGGCCAAGGUCUCGUG - 39
• Evidence: experimental ; unknown

Mature tae-miR9653a-3p

• Accession: MIMAT0035760
• Description: Triticum aestivum tae-miR9653a-3p mature miRNA
• Sequence: 54 - UUUGAGACUUUGGCCAUGGCC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289