Stem-loop zma-MIR160e

Accession

MI0001479

Description

Zea mays zma-MIR160e precursor miRNA

Literature search

21 open access papers mention zma-MIR160e
(74 sentences)

Sequence

1193 reads, 1069.0 reads per million, 24 experiments

agggaauaUGCCUGGCUCCCUGUAUGCCAcucgcacggcuaccacaccccgguggccgcugcggCUGGCGUGCGAGGUGCCAAGCAUGGccccc
.(((..(((((.((((.((.(((((((((.(((((((((((((.......)))))))).))))).))))))))).)).)))).)))))..))).

Structure

a   aa     C    U  C         c     -        ac 
 ggg  uaUGC UGGC CC UGUAUGCCA ucgca cggcuacc  a
 |||  ||||| |||| || ||||||||| ||||| ||||||||  c
 ccc  GUACG ACCG GG GCGUGCGGU ggcgu gccggugg  c
c   cG     A    U  A         C     c        cc 

Annotation confidence High

Genome context

7: 5114283-5114377 [-]

Mature zma-miR160e-5p

• Accession: MIMAT0001374
• Description: Zea mays zma-miR160e-5p mature miRNA
• Sequence: 9 - UGCCUGGCUCCCUGUAUGCCA - 29
• Evidence: not_experimental

Mature zma-miR160e-3p

• Accession: MIMAT0056562
• Description: Zea mays zma-miR160e-3p mature miRNA
• Sequence: 65 - CUGGCGUGCGAGGUGCCAAGCAUGG - 89
• Evidence: experimental ; unknown

References

1. Identifying microRNAs in plant genomes
   "Maher C, Timmermans M, Stein L, Ware D"
   "Proc IEEE CSB (2004) None:718-723