Stem-loop tae-MIR169

Accession

MI0016460

Description

Triticum aestivum tae-MIR169 precursor miRNA

Literature search

35 open access papers mention tae-MIR169
(125 sentences)

Sequence

19775 reads, 541.0 reads per million, 212 experiments

uggggguaagaggccaucuucgaUAGCCAAGGAUGAUUUGCCUGUGaaacucccuuggcagccgagcucucugccacagagagcggcguccggcgguuccauGGGCAAGUCACCCUGGGCUACCcgaaguaccucuuaccacaccccau
(((((((((((((....(((((.(((((.(((.(((((((((((((.((((.((..(((.(((..((((((((...)))))))))))))).)).)))).))))))))))))).))).)))))..)))))..))))))))....))))).

Structure

-     ----        ccau     -a     A   A             a    c  uu   a   ga        c 
 ugggg    guaagagg    cuucg  UAGCC AGG UGAUUUGCCUGUG aacu cc  ggc gcc  gcucucug  
 |||||    ||||||||    |||||  ||||| ||| ||||||||||||| |||| ||  ||| |||  |||||||| c
 acccc    cauucucc    gaagc  AUCGG UCC ACUGAACGGGuac uugg gg  cug cgg  cgagagac  
u     acac        --au     CC     G   C             c    c  -c   -   --        a 

Annotation confidence High

Genome context

Unknown

Mature tae-miR169-5p

• Accession: MIMAT0056499
• Description: Triticum aestivum tae-miR169-5p mature miRNA
• Sequence: 24 - UAGCCAAGGAUGAUUUGCCUGUG - 46
• Evidence: experimental ; unknown

Mature tae-miR169-3p

• Accession: MIMAT0018219
• Description: Triticum aestivum tae-miR169-3p mature miRNA
• Sequence: 103 - GGGCAAGUCACCCUGGGCUACC - 124
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443