Stem-loop tae-MIR1120b

Accession

MI0030404

Description

Triticum aestivum tae-MIR1120b precursor miRNA

Literature search

14 open access papers mention tae-MIR1120b
(46 sentences)

Sequence

87743 reads, 512.0 reads per million, 232 experiments

uaaauacucccUCUGUCCCAAAAUAUAAGAACauuuuugacacuauuguaauguuaaaaauguUCUUAUAUUGUGGGACAGAGGgaguaguuu
....((((((((((((((((.(((((((((((((((((((((.........))))))))))))))))))))).))))))))))))))))....

Structure

uaaa                A                     cua 
    uacucccUCUGUCCCA AAUAUAAGAACauuuuugaca   u
    |||||||||||||||| |||||||||||||||||||||   u
    augagGGAGACAGGGU UUAUAUUCUuguaaaaauugu   g
uuug                G                     aau 

Annotation confidence Medium

Genome context

7B: 15312620-15312712 [+]

Mature tae-miR1120b-5p

• Accession: MIMAT0056533
• Description: Triticum aestivum tae-miR1120b-5p mature miRNA
• Sequence: 12 - UCUGUCCCAAAAUAUAAGAAC - 32
• Evidence: experimental ; unknown

Mature tae-miR1120b-3p

• Accession: MIMAT0035794
• Description: Triticum aestivum tae-miR1120b-3p mature miRNA
• Sequence: 64 - UCUUAUAUUGUGGGACAGAGG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289