Stem-loop zma-MIR169l

Accession

MI0013199

Description

Zea mays zma-MIR169l precursor miRNA

Literature search

32 open access papers mention zma-MIR169l
(230 sentences)

Sequence

gUAGCCAGGGAUGAUUUGCCUGugguuccugucguugccaugccaaugccuguacuguucgaucuacgGGCAAAUCAUCCCUGCUACCg
(((((.(((((((((((((((((((.....((((..((..(((........)))..)).))))))))))))))))))))))))))))..

Structure

--     C                   uuccu    uu  ca   caa 
  gUAGC AGGGAUGAUUUGCCUGugg     gucg  gc  ugc   u
  ||||| |||||||||||||||||||     ||||  ||  |||    
  CAUCG UCCCUACUAAACGGgcauc     uagc  ug  aug   g
gC     -                   -----    -u  uc   ucc 

Annotation confidence Not enough data

Genome context

chr1: 303772025-303772113 [+]

Mature zma-miR169l-5p

• Accession: MIMAT0013988
• Description: Zea mays zma-miR169l-5p mature miRNA
• Sequence: 2 - UAGCCAGGGAUGAUUUGCCUG - 22
• Evidence: experimental ; Illumina [1]

Mature zma-miR169l-3p

• Accession: MIMAT0015323
• Description: Zea mays zma-miR169l-3p mature miRNA
• Sequence: 69 - GGCAAAUCAUCCCUGCUACC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716