Stem-loop tae-MIR9653b

Accession

MI0031538

Description

Triticum aestivum tae-MIR9653b precursor miRNA

Literature search

2 open access papers mention tae-MIR9653b
(3 sentences)

Sequence

30595 reads, 180 reads per million, 115 experiments

ccacggccaUGGCCAAGGUCUCUUGAGGCUuggccuugaagacuuuggccauguccaugg
(((.((.((((((((((((((.(((((((...))))))))))))))))))))).)).)))

Structure

   c  c              C       U 
cca gg caUGGCCAAGGUCU UUGAGGC  
||| || |||||||||||||| ||||||| u
ggu cc guaccgguuucaga aguuccg  
   a  u              -       g 

Annotation confidence Not enough data

Comments

This sequence was incorrectly named MIR2022 in [1].

Genome context

1D: 134547683-134547742 [+]

Mature tae-miR9653b

• Accession: MIMAT0036996
• Description: Triticum aestivum tae-miR9653b mature miRNA
• Sequence: 10 - UGGCCAAGGUCUCUUGAGGCU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511