Stem-loop tae-MIR9666a

Accession

MI0030388

Description

Triticum aestivum tae-MIR9666a precursor miRNA

Literature search

4 open access papers mention tae-MIR9666a
(6 sentences)

Sequence

219666 reads, 3650.0 reads per million, 229 experiments

ucauucggauucGCCAUCAUACGCCCAACCGUGcauuugauaugcauauauaugcaucacgagccaCGGUAGGGCUGUAUGAUGGCGAUaccgauugg
.((.((((..((((((((((((((((.((((((..((((..((((((....))))))..)))).)))))).)))).))))))))))))..)))).)).

Structure

u  u    au            -    A      ca    au      a 
 ca ucgg  ucGCCAUCAUAC GCCC ACCGUG  uuug  augcau u
 || ||||  |||||||||||| |||| ||||||  ||||  ||||||  
 gu agcc  AGCGGUAGUAUG CGGG UGGCac  gagc  uacgua a
g  u    aU            U    A      -c    ac      u 

Annotation confidence High

Genome context

Unknown

Mature tae-miR9666a-5p

• Accession: MIMAT0061485
• Description: Triticum aestivum tae-miR9666a-5p mature miRNA
• Sequence: 13 - GCCAUCAUACGCCCAACCGUG - 33
• Evidence: experimental ; unknown

Mature tae-miR9666a-3p

• Accession: MIMAT0035778
• Description: Triticum aestivum tae-miR9666a-3p mature miRNA
• Sequence: 67 - CGGUAGGGCUGUAUGAUGGCGAU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289