Stem-loop tae-MIR9672a

Accession

MI0030400

Description

Triticum aestivum tae-MIR9672a precursor miRNA

Literature search

2 open access papers mention tae-MIR9672a
(3 sentences)

Sequence

1404017 reads, 10494.0 reads per million, 235 experiments

ucuguuugaagugaagaugaUGCUUAAUGACAGUCGUGGUGucuuagaagagccaggcgacuaugucuacgcuggccauuaagcaucgucuuugccuaggacaCCACGACUGUCAUUAAGCAUCgccuucaccccaaacagagcc
((((((((..((((((.((((((((((((((((((((((((((((((....(((((..(((...)))....)))))......(((.......))))))))))))))))))))))))))))))))).))))))..))))))))...

Structure

---        aa      a                              ---------------aaga     --gc   u 
   ucuguuug  gugaag ugaUGCUUAAUGACAGUCGUGGUGucuuag                   gccag    gac  
   ||||||||  |||||| ||||||||||||||||||||||||||||||                   |||||    ||| a
   agacaaac  cacuuc gCUACGAAUUACUGUCAGCACCacaggauc                   cgguc    cug  
ccg        cc      c                              cguuucugcuacgaauuac     gcau   u 

Annotation confidence Medium

Genome context

5A: 67467149-67467293 [+]

Mature tae-miR9672a-5p

• Accession: MIMAT0056529
• Description: Triticum aestivum tae-miR9672a-5p mature miRNA
• Sequence: 21 - UGCUUAAUGACAGUCGUGGUG - 41
• Evidence: experimental ; unknown

Mature tae-miR9672a-3p

• Accession: MIMAT0035790
• Description: Triticum aestivum tae-miR9672a-3p mature miRNA
• Sequence: 104 - CCACGACUGUCAUUAAGCAUC - 124
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289