Stem-loop tae-MIR9659

Accession

MI0030377

Description

Triticum aestivum tae-MIR9659 precursor miRNA

Literature search

3 open access papers mention tae-MIR9659
(5 sentences)

Sequence

24218 reads, 4823.0 reads per million, 88 experiments

uccaggccuaguugggguggaUGCUGGGAAAACUAUUGAACUagauaaguuacaacucaucucgaaguaacuugucuggUCCAAUGGUUGUUCACGGCAUCcacaaagggccuggcuaucc
.((((((((.......(((((((((((((.((((((((.((((((((((((((...((.....)).)))))))))))))).)))))))).))).))))))))))...))))))))......

Structure

-----u        aguuggg          -   A        A              aac  a 
      ccaggccu       guggaUGCUG GGA AACUAUUG ACUagauaaguuac   uc u
      ||||||||       |||||||||| ||| |||||||| ||||||||||||||   || c
      gguccggg       cacCUACGGC CUU UUGGUAAC Uggucuguucaaug   ag u
ccuauc        ----aaa          A   G        C              --a  c 

Annotation confidence High

Genome context

Unknown

Mature tae-miR9659-5p

• Accession: MIMAT0056513
• Description: Triticum aestivum tae-miR9659-5p mature miRNA
• Sequence: 22 - UGCUGGGAAAACUAUUGAACU - 42
• Evidence: experimental ; unknown

Mature tae-miR9659-3p

• Accession: MIMAT0035767
• Description: Triticum aestivum tae-miR9659-3p mature miRNA
• Sequence: 80 - UCCAAUGGUUGUUCACGGCAUC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289